Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs61843442 chr10:43440403 G/A 2.48E-5 286 25.78 26.4 11.43 KM Plot
KIRP rs61843456 chr10:43445023 A/T 2.48E-5 286 25.78 26.4 11.43 KM Plot
KIRP rs61843457 chr10:43446964 G/T 2.48E-5 286 25.78 26.4 11.43 KM Plot
KIRP rs61843459 chr10:43447254 G/A 2.48E-5 286 25.78 26.4 11.43 KM Plot
KIRP rs61845260 chr10:43447385 G/C 2.48E-5 286 25.78 26.4 11.43 KM Plot
KIRP rs61845261 chr10:43448341 C/T 2.52E-5 285 25.93 26.4 11.43 KM Plot
KIRP rs61845262 chr10:43451185 G/A 2.52E-5 285 25.93 26.4 11.43 KM Plot
KIRP rs61845264 chr10:43458888 C/T 2.75E-5 281 25.82 26.52 11.43 KM Plot
KIRP rs61845266 chr10:43465694 A/C 2.44E-5 286 25.82 26.4 11.43 KM Plot
KIRP rs61845268 chr10:43466182 C/T 2.44E-5 286 25.82 26.4 11.43 KM Plot
KIRP rs61845269 chr10:43466969 G/T 2.44E-5 286 25.82 26.4 11.43 KM Plot
KIRP rs61845270 chr10:43467006 C/T 2.44E-5 286 25.82 26.4 11.43 KM Plot
KIRP rs61845271 chr10:43469492 C/G 2.4E-5 287 25.7 26.4 11.43 KM Plot
KIRP rs61845272 chr10:43470884 G/T 2.4E-5 287 25.7 26.4 11.43 KM Plot
KIRP rs61845274 chr10:43473019 G/C 2.4E-5 287 25.7 26.4 11.43 KM Plot